init

pipeline/generators/__init__.py

@@ -0,0 +1,5 @@
+from .estimate_histplot import generate_estimate_histplot
+
+GENERATORS = [
+    generate_estimate_histplot
+]

pipeline/generators/estimate_histplot.py

@@ -0,0 +1,6 @@
+from ..run import Run
+from pathlib import Path
+from typing import Generator
+
+def generate_estimate_histplot(run: Run, output_dir: Path) -> Generator[Path]:
+    raise NotImplementedError

pipeline/generators/helpers.py

@@ -0,0 +1,6 @@
+import pandas as pd
+from typings import List
+
+def must_have_columns(df: pd.DataFrame, columns: List[str]):
+    if not all(col in df.columns for col in columns):
+        raise ValueError(f"DataFrame is missing required columns: {columns}")